Question: (Closed) IGV Visualization Insert Size
0
gravatar for rse
9 weeks ago by
rse30
United States
rse30 wrote:

Hi,

I have a question regarding visualization of the large structural variations through IGV. I am visualizing large variations for a case. I observe dark red, blue and green reads which denotes deletion, insertion and duplication respectively according to the IGV manual. The reads have a insert size and have a mate region in other genes/regions. I want to ask if the insert size indicate size of deletion/insertion/duplication? I am observing insert size of 3.3 Mb, but the read is only 200-300 bp.

Thank you

Regards

sequencing next-gen alignment • 193 views
ADD COMMENTlink modified 7 weeks ago by Kevin Blighe13k • written 9 weeks ago by rse30

Closed as duplicated here: IGV Visualization Insert Size

ADD REPLYlink written 7 weeks ago by Kevin Blighe13k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 949 users visited in the last hour