Question: HyPhy or PAML: Testing Multiple Hypotheses with the same phylogeny/alignment?
gravatar for space-slash-ellipsis
8 months ago by
space-slash-ellipsis0 wrote:

Is it appropriate to test for multiple hypotheses with PAML or HyPhy? Like, for example, would it be statistically valid to test two of the hypotheses listed at the bottom of this page on one alignment/phylogeny?

ADD COMMENTlink modified 15 days ago by Biostar ♦♦ 20 • written 8 months ago by space-slash-ellipsis0

Sure, why not? - that's how research is conducted, is it not? Provided your input data suits the conditions of each analysis protocol, there should be no issue testing different hypotheses.

ADD REPLYlink modified 8 months ago • written 8 months ago by Kevin Blighe28k
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