splicegrapher and bam file

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6.3 years ago

qudrat ▴ 100

Hello, I have installed splicegrapher but do not know which command to use to make splicegraph database. I have BAM file produced from TopHat.

RNA-Seq splicegrapher • 1.1k views

ADD COMMENT • link updated 5.2 years ago by Biostar 20 • written 6.3 years ago by qudrat ▴ 100

1

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... The first step generates a putative transcript database

?????

ADD REPLY • link 6.3 years ago by Pierre Lindenbaum 161k

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