Question: Plots in R using phyloseq
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gravatar for arunsaikirans
2.7 years ago by
arunsaikirans0 wrote:

Hi all, I am trying to create barplots for my metagenomic data via R and phyloseq, I should create plots of a single specified genus or species for all my samples. Could any one explain how to create this using R code???

Thanks Kiran

plot image

phyloseq R • 2.0k views
ADD COMMENTlink modified 2.7 years ago • written 2.7 years ago by arunsaikirans0

Hi

genus_Thiobacillus = subset_taxa(BTM, Genus == "g__Thiobacillus")

myplot <- plot_bar(genus_Thiobacillus ,"X.SampleID", fill = "Specie")

ADD REPLYlink modified 2.3 years ago • written 2.3 years ago by ricardofull10
0
gravatar for arunsaikirans
2.7 years ago by
arunsaikirans0 wrote:

https://ibb.co/dz4F7G

ADD COMMENTlink written 2.7 years ago by arunsaikirans0

Should create plots like this need help.

ADD REPLYlink written 2.7 years ago by arunsaikirans0
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