Plots in R using phyloseq
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4.9 years ago

Hi all, I am trying to create barplots for my metagenomic data via R and phyloseq, I should create plots of a single specified genus or species for all my samples. Could any one explain how to create this using R code???

Thanks Kiran

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R PHYLOSEQ • 2.9k views
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Hi

genus_Thiobacillus = subset_taxa(BTM, Genus == "g__Thiobacillus")

myplot <- plot_bar(genus_Thiobacillus ,"X.SampleID", fill = "Specie")

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Should create plots like this need help.

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