Empty output field for certain samples in VSEARCH output
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6.3 years ago
richard • 0

Hey, I managed to get vsearch running with my dataset but in the output it returns some empty lines like these: (see pastebin file at https://pastebin.com/8gP3R5NY)

At line 3 and 5 the score is 0 and the chimeric flag is N (no) while there is no data at all in the rest ofthe columns. Anyone got a clue? Might it be that the sample wasn't found in the reference DB?

Thanks in advance.

sequencing • 544 views
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