I am trying to run blastx using the command below, but the output is not a separate file – the results only print to my terminal, rather than to a file. Any advice?
blastx -query filename -task blastx-fast -db nr -evalue 1e-5 -outfmt 5
Notes: I have the blast_nr database downloaded and this command is executed in that directory. I tried the default outfmt and the same thing happened.