Question: Number of individuals in 1000genomes superpopulations?
0
gravatar for spiral01
20 months ago by
spiral01100
spiral01100 wrote:

I am working with 1000genomes phase3 variation data and looking at shared variants between the superpopulations (EAS, AMR, AFR, EUR, SAS).

I need to know how many individuals are in each superpopulation to calculate nucleotide diversity and tajima's d for shared data (eg EAS and AFR shared variants). I cannot seem to find this information on the 1000genomes website, although it must definitely be there?

snp • 571 views
ADD COMMENTlink modified 20 months ago by trausch1.4k • written 20 months ago by spiral01100
3
gravatar for trausch
20 months ago by
trausch1.4k
Germany
trausch1.4k wrote:

http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/integrated_call_samples_v3.20130502.ALL.panel

ADD COMMENTlink written 20 months ago by trausch1.4k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1266 users visited in the last hour