Question: Cannot build Genetree using WGCNA
gravatar for guanrujun51132
2.7 years ago by
guanrujun511320 wrote:

I'm trying to using WGCNA to analyze the TCGA Database to to build up gene-co-expression network. I have downloaded the BRCA__gene.normalized_RNAseq__tissueTypeAll.txt and input this into WGCNA. But when it goes to

geneTree = flashClust(as.dist(dissTOM),method="average");

It shows

Error in hclust(d, method, members) : NA/NaN/Inf in foreign function call (arg 11)

Anybody knows how to solve it? Thanks.

rna-seq tcga wgcna • 833 views
ADD COMMENTlink written 2.7 years ago by guanrujun511320
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