Question: Cannot build Genetree using WGCNA
0
gravatar for guanrujun51132
2.7 years ago by
guanrujun511320 wrote:

I'm trying to using WGCNA to analyze the TCGA Database to to build up gene-co-expression network. I have downloaded the BRCA__gene.normalized_RNAseq__tissueTypeAll.txt and input this into WGCNA. But when it goes to

geneTree = flashClust(as.dist(dissTOM),method="average");

It shows

Error in hclust(d, method, members) : NA/NaN/Inf in foreign function call (arg 11)

Anybody knows how to solve it? Thanks.

rna-seq tcga wgcna • 833 views
ADD COMMENTlink written 2.7 years ago by guanrujun511320
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 671 users visited in the last hour