Hi everyone, my name is Samir. I am a postdoc at Mount Sinai. I am very new to genomics and computational biology. I am trying to install HiC Pro, but having difficulty doing so. I downloaded the HiC-Pro-2.10.0.tar.gz file and unzipped it. I ran the following code in the terminal as suggested and received an error.
tar -zxvf HiC-Pro-2.10.0.tar.gz tar: Error opening archive: Failed to open 'HiC-Pro-2.10.0.tar.gz'
I installed all the dependencies via homebrew, and I have edited the config-install.txt file as shown below:
PREFIX = /usr/local/Cellar BOWTIE2_PATH = /usr/local/Cellar/bowtie2/2.3.4 SAMTOOLS_PATH = /usr/local/Cellar/samtools/1.7 R_PATH = /usr/local/Cellar/r/3.4.3_1 PYTHON_PATH = /usr/local/Cellar/python/2.7.14_2 CLUSTER_SYS = SLURM
I would really appreciate your help. Thanks.