Question: Installing the new tool "table2asn_GFF"
0
gravatar for arsilan324
13 months ago by
arsilan32470
arsilan32470 wrote:

Hi all,

I am trying to install this tool "table2asn_GFF" but unable to do so. I have used chmod +x and still no help

-bash: table2asn: command not found

There is no instructions given by NCBI as well about installation. Can you please guide how can I do it?

Thank you very much in advance!

table2asn installation ncbi • 398 views
ADD COMMENTlink modified 13 months ago • written 13 months ago by arsilan32470

Which OS are you using? Have you tried ./table2asn_GFF -h

ADD REPLYlink written 13 months ago by Sej Modha4.1k

I am using macOS Sierra 10.12.6. Yes this is also not working...

PS: Is there any installation step required after chmod +x ?

ADD REPLYlink written 13 months ago by arsilan32470

what is the output of

file ./table2asn_GFF

and

ls -lah  ./table2asn_GFF

?

ADD REPLYlink modified 13 months ago • written 13 months ago by Pierre Lindenbaum118k

Here it is...

ubt80:pre-req arslan$ file ./table2asn_GFF
./table2asn_GFF: cannot open `./table2asn_GFF' (No such file or directory)

ubt80:pre-req arslan$ ls -lah  ./table2asn_GFF
ls: ./table2asn_GFF: No such file or directory

when i entered the file name exactly, i got it...

ubt80:pre-req arslan$ file ./mac.table2asn_GFF
./mac.table2asn_GFF: Mach-O 64-bit executable x86_64

ubt80:pre-req arslan$ ls -lah  ./mac.table2asn_GFF
-rwxr-xr-x@ 1 arslan  1109757508    39M 12 Feb 10:12 ./mac.table2asn_GFF
ADD REPLYlink modified 13 months ago • written 13 months ago by arsilan32470

run your executable as

 ./mac.table2asn_GFF
ADD REPLYlink written 13 months ago by Pierre Lindenbaum118k
0
gravatar for Sej Modha
13 months ago by
Sej Modha4.1k
Glasgow, UK
Sej Modha4.1k wrote:

./mac.table2asn_GFF -h should bring up the help for you.

ADD COMMENTlink written 13 months ago by Sej Modha4.1k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1072 users visited in the last hour