Question: estimating inbreeding from runs of homozygosity

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Tears •

**0**wrote:Hello,

I am using data genotyped on 777K and 150K to estimate the level of relatedness in cattle.

the formula is as follows F=L_roh/L_auto, where L_roh is the sum of ROH per individual and L_auto is the total length of the autosome covered by snps.

How do I estimate the length of the autosomal genome covered by SNPs?

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modified 2.3 years ago
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Kevin Blighe ♦

**60k**• written 2.3 years ago by Tears •**0**