Fancy dotplot for GO enrichment result display
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3.7 years ago

Dear all, i really like the dotplot function in clusterprofiler package. The problem is that i have enrichment from other sources and i cannot really produce the same object which is used but clusterprofiler that uses to do enrichment using DAVID. So my question is, could someone point me to a similar dotplot package/function for achieving the same plot? thanks in advance here the plot: heretheplotiwant

clusterprofiler dotplot GO enrichment • 4.9k views
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Not precisely what you are looking for, thus only adding this as a comment: I recently posted this for plotting results from DAVID: Clustering of DAVID gene enrichment results from gene expression studies

It can be adapted to any type of enrichment. All that you need to construct is a 'gene-by-annotation' matrix, where a particular gene has 1 if present in a particular enrichment term, or 0 if not.

Another recent DAVID barplot post: A: DAVID functional Analysis and its visualization of GO terms using Bar plot

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