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Question: SNP & INDELs
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gravatar for krishnan0680
3.0 years ago by
krishnan0680 • 0
Rennes, France
krishnan0680 • 0 wrote:

Hi all,

From a DNA seq experiment I have identified some SNP's and INDEL's. If I wanted to show them along the chromosomes how can I do it?

Thanks all,

K
sequencing snp next-gen • 897 views
ADD COMMENT • link •
modified 3.0 years ago • written 3.0 years ago by krishnan0680 • 0

Load the VCF into the IGV browser. If you want a more elaborate answer, please ask in more detail, especially how exactly you want to visualize them and what the final goal is.

ADD REPLY • link written 3.0 years ago by ATpoint ♦ 46k

HI I have identified the SNPs and INDELs in my replicates..But now I wanted to show them in one chromosome...HOw can I do it? Thanks, K

ADD REPLY • link written 3.0 years ago by krishnan0680 • 0
0
gravatar for krishnan0680
3.0 years ago by
krishnan0680 • 0
Rennes, France
krishnan0680 • 0 wrote:

Basically what I wanted to do is for a presentation how can I show it in a figure to the audiences?

Best, K
ADD COMMENT • link written 3.0 years ago by krishnan0680 • 0
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