Question: SNP & INDELs
0
gravatar for krishnan0680
2.8 years ago by
Rennes, France
krishnan06800 wrote:

Hi all,

From a DNA seq experiment I have identified some SNP's and INDEL's. If I wanted to show them along the chromosomes how can I do it?

Thanks all,

K

sequencing snp next-gen • 842 views
ADD COMMENTlink modified 2.8 years ago • written 2.8 years ago by krishnan06800

Load the VCF into the IGV browser. If you want a more elaborate answer, please ask in more detail, especially how exactly you want to visualize them and what the final goal is.

ADD REPLYlink written 2.8 years ago by ATpoint42k

HI I have identified the SNPs and INDELs in my replicates..But now I wanted to show them in one chromosome...HOw can I do it? Thanks, K

ADD REPLYlink written 2.8 years ago by krishnan06800
0
gravatar for krishnan0680
2.8 years ago by
Rennes, France
krishnan06800 wrote:

Basically what I wanted to do is for a presentation how can I show it in a figure to the audiences?

Best, K

ADD COMMENTlink written 2.8 years ago by krishnan06800
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