Question: Tools to do a linear or logistic regression of DEG
0
gravatar for amy16
3 months ago by
amy1620
amy1620 wrote:

Hi all, I have completed the DEG analysis following the new tuxedo pipeline and have ended up with a long list of genes/transcripts. I was thinking of doing a linear or logistic regression analysis on this list to get the best pick of the gene/ transcript that could be associated with the molecular response at the given condition. So, can you please suggest me some good tools available to do this?

Thanks

deg rna-seq • 165 views
ADD COMMENTlink modified 3 months ago by Kritika250 • written 3 months ago by amy1620

You can use R.

Linear regression

Logistic regression

ADD REPLYlink modified 3 months ago • written 3 months ago by arta480
0
gravatar for Kritika
3 months ago by
Kritika250
India
Kritika250 wrote:

You can use R for running logistic and linear analysis

ADD COMMENTlink written 3 months ago by Kritika250

Which package in R do you recommend that will be more suitable for this type of analysis?

ADD REPLYlink written 3 months ago by amy1620
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