Question: ENSDAR genes to MGI symbols
0
gravatar for clizama
12 months ago by
clizama0
clizama0 wrote:

HI,

Has any good tool to convert the ENSDAR gene names in MGI symbols?

Thanks

gene • 298 views
ADD COMMENTlink modified 12 months ago by Jean-Karim Heriche18k • written 12 months ago by clizama0
1
gravatar for Jean-Karim Heriche
12 months ago by
EMBL Heidelberg, Germany
Jean-Karim Heriche18k wrote:

I assume ENSDAR refers to zebrafish genes in Ensembl and MGI to the Mouse Genome informatics database. If so, what you want is find the mouse orthologs of the fish genes. You can do this using Ensembl's BioMart or its perl API. Ensembl uses MGI symbols for the mouse genes.

ADD COMMENTlink written 12 months ago by Jean-Karim Heriche18k

Thanks, I will try Ensembl's BioMart.

ADD REPLYlink written 12 months ago by clizama0
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