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6.2 years ago
hml19870207
•
0
what is the format of the ld-list-snp parameter?
I am calculating the LD for some snps and in order to get the pair-wise ld for a specific snp list, I use ld-snp-list mysnp.txt, but it shows could not open the txt file? so can anybody help?
This is the snp list:
exm1196037
rs214250
rs214249
rs214246
rs7200589
rs1204042
exm1196059
exm1196065
rs11649255
rs11644916
rs3842949
rs3848361
rs17136060
rs7359414
rs3916990
rs11646942
rs9925273
rs7195617
rs12921862
rs11644916
This already solved, thanks
Please post the solution as an answer below so it can help someone in future. Just saying the problem solved does not provide closure for this thread.