Question: How to convert GTF to gff file for read count using HTSeq
0
gravatar for Bioinfonext
2.2 years ago by
Bioinfonext220
Korea
Bioinfonext220 wrote:

Hi,

HTseq need gff file for reads counts from alingment sam file. I have GTF file which I used for read alignment, How can I convert this into gff file.

Thanks

rna-seq • 1.1k views
ADD COMMENTlink modified 2.2 years ago by Buffo1.8k • written 2.2 years ago by Bioinfonext220
4
gravatar for Buffo
2.2 years ago by
Buffo1.8k
Buffo1.8k wrote:

You can use GTF for HT-seq, you don´t have to convert nothing.

ADD COMMENTlink written 2.2 years ago by Buffo1.8k
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