I am trying to get gene symbols for gene ids that I got for mouse datasets. Gene ids look like that:
0610009B22Rik. The code that I am trying to utilize is the following one:
ensembl <- useMart("ensembl", dataset="mmusculus_gene_ensembl") mouse_gene_ids <- dataset[, 1] foo <- getBM(attributes=c('ensembl_gene_id', 'external_gene_name'), filters = 'genedb', values = mouse_gene_ids, mart = ensembl)
I am getting
zero results as an output after the query runs. I guess
filters parameter is wrong. Any suggestions would be greatly appreciated.