Question: computing time for BWA index
0
gravatar for marongiu.luigi
6 months ago by
Germany, Mannheim, UMM
marongiu.luigi310 wrote:

Hello,

I am creating the BWA indices for the human genome build 19 (GRCh37) on an AMD machine with 8 processors, 4 GHz and 32 GB of RAM. The process is taking ages, and in particular has stalled on construct SA from BWT and Occ for a couple of days now. Is this normal or should I abort the process and restart?

Thank you

next-gen assembly genome • 302 views
ADD COMMENTlink modified 6 months ago by Devon Ryan84k • written 6 months ago by marongiu.luigi310
0
gravatar for Devon Ryan
6 months ago by
Devon Ryan84k
Freiburg, Germany
Devon Ryan84k wrote:

Abort and restart, it shouldn't take days.

ADD COMMENTlink written 6 months ago by Devon Ryan84k
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