What is the unit of TCGA RNA-seq data downloaded from cBioPortal?
1
1
Entering edit mode
3.7 years ago
Amy ▴ 20

Hi,

Many thanks in advance! I downloaded RNA-seq data of lung adenocarcinoma from cBioPortal: http://www.cbioportal.org/study?id=luad_tcga_pub#summary

This data includes the file entitled data_RNA_Seq_v2_expression_median.txt and my question is what is the unit of figures included in this file??

I checked the description about this file included in the downloaded data and also spent hours to figure out if it's RPKM, read count etc, but couldn't find a clue. Any comment would be greatly appreciated!!!

Thank you so much,

Amy

RNA-Seq • 3.4k views
ADD COMMENT

Login before adding your answer.

Traffic: 1210 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6