Question: BWA error [bwt_restore_sa]
0
gravatar for sarahkhanishere
8 months ago by
sarahkhanishere0 wrote:

Index FASTA genome:

bwa index hg19.fasta

hg19.fasta hg19.fasta.amb hg19.fasta.ann hg19.fasta.bwt hg19.fasta.pac

Aligning:

bwa mem hg19.fasta IonXpress_001.fastq > IonXpress_001.sam

[bwt_restore_sa] fail to open file 'reference/hg19.fasta.sa' : No such file or directory

next-gen • 292 views
ADD COMMENTlink modified 8 months ago by ag1805x100 • written 8 months ago by sarahkhanishere0
1
gravatar for ag1805x
8 months ago by
ag1805x100
India
ag1805x100 wrote:

Please recheck for the location of the file reference/hg19.fasta.sa.

ADD COMMENTlink written 8 months ago by ag1805x100
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