Entering edit mode
6.6 years ago
sacha
★
2.4k
Hi,
Do you know which tool to use to generate and print stem-loop from from a short sequence ?
For instance, using the following mir sequence:
>hsa-mir-7106 MI0022957
GCUUCUGGGAGGAGGGGAUCUUGGGAGUGAUCCCAACAGCUGAGCUCCCUGAAUCCCUGUCCCAG
I would like to print the following alignement
gcuu gga cuu gauccc
5' cuggga ggggau gggagu a
|||||| |||||| |||||| a
3' gacccu ucccua cccucg c
---- --g agu agucga
That's perfect ! Thanks for the quick answer