Question: GEO2R Gene Expression
gravatar for fire_water
10 days ago by
United States
fire_water50 wrote:


I would like to automate the following process that uses GEO2R to analyze gene expression. For each contig I provide, this is the workflow I follow:

  1. browse to
  2. click Profile Graph
  3. Enter ID: assembledIsotigs_Contig9526
  4. click Set
  5. click Sample Values
  6. copy results from pop-up window:

enter image description here

Instead of going through the above workflow for each contig, is it possible to automate the process using something like the getGEO() function from Bioconductor?


gene • 57 views
ADD COMMENTlink modified 10 days ago • written 10 days ago by fire_water50
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