Entering edit mode
6.1 years ago
caspase8mach
▴
20
Hello All,
I am in the process of analyzing huge DNA methylation data and your help on this will be very helpful.
I have various .txt files, each file having 1 column and approx 450K rows representing 450K CpGs which are either methylated or not.
What kind of tools / scripts / resources (R/Python) can I use to analyze multiple such .txt files?
Thanks a lot.
Perhaps use something like
methylkit(https://bioconductor.org/packages/release/bioc/html/methylKit.html )