Entering edit mode
6.1 years ago
Bweil2
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10
I want to see which genes in archloro.txt match both lines of ArabidopsisParalogue.txt. I tried grep -f but that would just find the genes in both files have in common and not 2 genes that are in the same line. Any ideas on how to do this?
head archloro.txt
AT1G01080|AT1G01080. 286 0.975 0.048 0.003 0.037 C 1
AT1G01080|AT1G01080. 293 0.975 0.048 0.003 0.037 C 1
AT1G01080|AT1G01080. 294 0.975 0.048 0.003 0.037 C 1
AT1G01090|AT1G01090. 428 0.962 0.121 0.003 0.038 C 1
AT1G01250|AT1G01250. 192 0.736 0.079 0.031 0.246 C 3
AT1G01520|AT1G01520. 258 0.559 0.128 0.222 0.120 C 4
AT1G01520|AT1G01520. 287 0.559 0.128 0.222 0.120 C 4
AT1G01550|AT1G01550. 349 0.805 0.215 0.015 0.092 C 3
AT1G01690|AT1G01690. 450 0.685 0.105 0.005 0.160 C 3
AT1G01690|AT1G01690. 450 0.766 0.100 0.004 0.136 C 2
I could not post ArabidopsisParalogue.txt due to formating but there are two columns of genes listed.