Question: (Closed) What web services can annotate a VCF coming from Streptococcus or Meningococcus whole genome alignment and variant calling?
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22 months ago by
cambridge_hockey0 wrote:

What web services can annotate a VCF coming from Streptococcus or Meningococcus whole genome alignment and variant calling?

ADD COMMENTlink modified 22 months ago by rse90 • written 22 months ago by cambridge_hockey0

Ve!P from Ensembl.

ADD REPLYlink written 22 months ago by genomax76k

Annovar, Gemini, VEP, snpEff

ADD REPLYlink written 22 months ago by rse90

Hello cambridge_hockey!

We believe that this post does not fit the main topic of this site.

Not a real question

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

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ADD REPLYlink written 22 months ago by Michael Dondrup47k

Interesting. Michael thinks this is a bot - initially, I doubted but as I re-read the question it does feel more and more like it.

ADD REPLYlink written 22 months ago by Istvan Albert ♦♦ 82k

There are similar bots on SO too: https://biology.stackexchange.com/users/36264/player777 check out the profile, it is best as a musician though. Whenever there are questions on GWAS in bacteria or variant annotation I would take a closer look.

ADD REPLYlink modified 22 months ago • written 22 months ago by Michael Dondrup47k
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