Question: (Closed) Differential expression analysis of genes
0
gravatar for Uday Rangaswamy
12 months ago by
Indian Institute of Technology, Madras, India
Uday Rangaswamy100 wrote:

How do we know if a particular gene is up or down regulated from the results of DESeq2?

rna-seq deseq2 gene • 274 views
ADD COMMENTlink written 12 months ago by Uday Rangaswamy100

Hello Uday Madappa!

Please check the DESeq2 vignette (https://bioconductor.org/packages/3.7/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#differential-expression-analysis )

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

ADD REPLYlink modified 12 months ago • written 12 months ago by genomax63k

If you can point out to me the heading in the manual that contains the concept of up and down regulated genes, I'd be really greatful. Please help.

ADD REPLYlink written 12 months ago by Uday Rangaswamy100

I checked it and i did not find it. Could you help? Please.

ADD REPLYlink written 12 months ago by Uday Rangaswamy100
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