Question: How to separe eRNA by orientation from with GRO-SEQ data
gravatar for ZheFrench
4 months ago by
ZheFrench140 wrote:

eRNAs are bi-directionally transcribed. I was wondering how to separe them from a bam to make distinct bigwig using orientation and strand appartenance.

erna gro-seq • 147 views
ADD COMMENTlink written 4 months ago by ZheFrench140

Do you want to identify bidirectional transcripts ? or want to create a bigwig that displays transcripts in a strand specific manner ?

ADD REPLYlink written 4 months ago by geek_y8.7k

Identify bidirectional transcripts, separe them into two different bam, to make 2 bigwigs to display distinctly depending both orientation.

ADD REPLYlink modified 4 months ago • written 4 months ago by ZheFrench140
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