Would be very grateful for help.
I have a VCF.gz file for imputed SNP data. I know for a fact that this file contains imputation (INFO) quality scores as in a subsequent QC step I've used bcftools to only keep SNPs with an INFO score >0.70 bcftools view -Ou -i 'INFO>0.7'
However, I am struggling to understand how to view the actual INFO score for an individual SNP from the VCF.gz file.
Any ideas!?