Question: What tools I should use to make such a bioinformatic picture?
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gravatar for younglin113
2.5 years ago by
younglin11350
younglin11350 wrote:

I saw this picture in an article, and I really want to know how can I learn to make this . I will be really thankful if you can help me! here is the picture:
TIM 20180403111303

software error • 666 views
ADD COMMENTlink modified 3 months ago by bernatgel2.6k • written 2.5 years ago by younglin11350

Can you update the link? I get a "bad gateway" error.

ADD REPLYlink written 2.5 years ago by Devon Ryan96k

Currently, the picture is just 130x105 pixels, I can't see any details.

ADD REPLYlink written 2.5 years ago by h.mon31k

younglin113 : To add an in-line image to your post

Using Markdown syntax.

Upload your image:

  1. Pick a free image upload site. I'd recommend imgbb (accessible in most countries) or cubeupload (easier to use)

  2. Upload your image on the site

Markdown method

  • Get the direct URL to the image. To do this, you'll need to right click on the uploaded image and choose "Copy Image Address" or an equivalent option.

    On cubeupload, simply copy the first link under the uploaded image

  • Click on the image option on the biostar edit toolbar (highlighted in red below), and paste the copied URL in the dialog box.

ADD REPLYlink modified 2.5 years ago by RamRS30k • written 2.5 years ago by genomax90k

sorry for the unsharp picture I've posted , I am a new here, thanks for your help. And here is the new address of this picture, thanks!! https://ibb.co/nceB6c

ADD REPLYlink written 2.5 years ago by younglin11350

I have added this image to the original post.

Please use ADD REPLY/ADD COMMENT when responding to existing posts to keep threads logically organized.

ADD REPLYlink written 2.5 years ago by genomax90k

That's just a UCSC Genome Browser screen capture, with custom tracks added for ChIP signals (smooth-logged, it appears), and existing gene annotation tracks edited to have different color.

Take a look here: A: Visualization for ChIP-seq analysis

ADD REPLYlink written 2.5 years ago by Kevin Blighe65k
2
gravatar for bernatgel
3 months ago by
bernatgel2.6k
Barcelona, Spain
bernatgel2.6k wrote:

You can create images like that with karyoploteR, an R/Bioconductor package.

In the karyoploteR tutorial page you can find the step-by-step explanation plus code to create a somewhat similar image and from there you can modify sizes, colors and data to get what you need.

enter image description here

ADD COMMENTlink written 3 months ago by bernatgel2.6k
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