I have been using mpiBlast for some time. I am trying to format latest NR database with mpiformatdb but it gives following errors:
Sequence id "" is not parseable. Formating failed at
ERROR: [000.000] FDBDumpDeflineAsn() failed. Formating terminated abnormaly
Removed single-volume database ./nr.015
FATAL ERROR: [001.000] Fatal error when adding sequence to BLAST database.
Command I have used for formatting is : mpiformatdb -N 16 -i ./nr -o T -p T
When I try mpiformatdb with some other smaller databases and sequence files , It works fine and formats properly.
Hi, Have you found a solution to this problem? I am facing the same issue as a part of my research. Kindly let me know if you figure it out and I'll let you know too.
Thanks