I've just installed tailseeker 3.1.7 on an HPC cluster. And even thou the installation seems fine I can not run the program. This is the error message I get:
(env) [fs@hpcs03 run]$ tseek -j Tailseeker 3.1.5 - High-throughput measurement of poly(A) tails NameError in line 101 of /home/bin/tailseeker-3.1.7-bundle-ubuntu_xenial/tailseeker/snakesupport.py: name 'TABIX_CMD' is not defined File "/home/bin/tailseeker-3.1.7-bundle-ubuntu_xenial/tailseeker/main.py", line 32, in <module> File "/home/bin/tailseeker-3.1.7-bundle-ubuntu_xenial/tailseeker/snakesupport.py", line 101, in <module>
I have the tailseeker.yaml file in the folder I run the command from and all dependencies are installed and found when I run the setup.sh. Anyone have suggestions?
Thanks in advance! Cheers! Fredrik