I integrate proteome annotation from the eggnog emapper into a structured database. I'm getting annotations in the form described on the github emapper page. The GO terms look in practice like this:
for the integration I need to map it to one of the principal categories
- P (biological process)
- F (molecular function)
- C (cellular component)
Which ranges of GO categories are part of which of these group? Is there some explanation to this? What I found is the GAF 2.1 format definition which requires the definition of the Aspect . Is there some resource available that can map GO category to it's toplevel?
Hi Vijay Lakhujani, great idea! Thanks for the link, I didn't know their API - I'll try to give it a go