Question: Modular differential connectivity
0
gravatar for anand.gururajan
2.2 years ago by
anand.gururajan0 wrote:

Hi.

Using RNA-seq data, i've managed to generate modules using WGCNA that are unique to specific experimental groups. This was using the tutorial on the UCLA website.

I'm now trying to look at connectivity within a module. I have access to the R script (https://www.rdocumentation.org/packages/DGCA/versions/1.0.1/topics/moduleDC) but am wondering if there's a good tutorial using a sample data set on how it should be used?

Thanks everyone.

rna-seq R • 790 views
ADD COMMENTlink modified 2.2 years ago by Kevin Blighe61k • written 2.2 years ago by anand.gururajan0
0
gravatar for Kevin Blighe
2.2 years ago by
Kevin Blighe61k
University College London
Kevin Blighe61k wrote:

Not sure about tutorials for this specific topic but you could look at a previous work, also by Horvath (WGCNA co-developer), where they performed some differential analysis:

Kevin

ADD COMMENTlink written 2.2 years ago by Kevin Blighe61k

this is what i been looking for when I search "module differential connectivity " i get this library "DGCA" .Its bit confusing if it can be done using WGCNA only or the DGCA library .

ADD REPLYlink modified 9 months ago • written 9 months ago by krushnach80810
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