Substitution model testing tool for linux command line
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4.1 years ago
shadowstep • 0

Mega 7 has a function to find best DNA models, it will give a complete analyze table with parameters

In linux command line, is there a package that can do this job? I want to validate the results from Mega. Thank you.

substitution model • 951 views
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4.1 years ago
h.mon 34k

There are jModelTest2 (I believe it has been retired) and ModelTest-NG (sucessor of jModelTest). IQ-TREE also apparently can also perform substitution model selection. There are some other older tools, but I think those are the most recent ones.

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