I am trying to use annovar for mosue data. I used this command to create the mouseDB:
perl annotate_variation.pl -buildver mm10 -downdb -webfrom annovar refGene mousedb/
And it works fine and got he refgene db for mouse.
Now, I need to build the rest of annotation fields. something like humanDB: Something like this work on human but doesn't in mouse:
perl annotate_variation.pl -buildver mm10 -downdb -webfrom annovar dbnsfp30a mousedb/
Anyone knows the corresponding way for getting annotations for mouse?