News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
0
gravatar for AABI
10 months ago by
AABI110
USA
AABI110 wrote:

RNA seq

Hands-on Training in Advanced Transcriptomics (RNASeq) Analysis

May 15-18,2018


where?

National Institutes of Health 9000 Rockville Pike Building 60, Room 162 Bethesda, MD 20892, USA


Objectives

Apart from performing the routine differential expression analysis using two different suite oftools, this hands-on training will help participants learn advanced RNA-Seq analysis techniquesand tools for detecting snps, fusion genes, allele specific expressions, circular RNAs,viral/bacterial sequence identification, alternative polyadenylation and transcriptional regulatorynetwork analysis.

Hands-on Skills/Tools Taught

  • Differential expression analysis : Tuxedo tools
  • Differential expression analysis : Trinity tools
  • Fusion gene analysis : Tophat-Fusion
  • SNP detection : GATK
  • Allele specific expression : WASP
  • Circular RNA identification : circexplorer
  • Alternative polyadenylation : DaPars
  • Viral integration : VirusFinder
  • Network analysis : Cytoscape

Highlights

  • Participants will work with a Graphic User Interface based Linux Desktop environment in the Amazon Cloud, that is specially configured to run popular open source RNA-Seq analysis tools.
  • Cloud image with fully configured advanced RNA-Seq tools, freely provided to participants
  • Training provided by experienced active NIH researchers
  • Cookbook style bound manual for all exercises.
  • Direct, after training support through exclusive forum membership
  • Continuing Educational Credits

For more information and registration, please visit the following page; Information and Registration

training rna-seq snps news • 349 views
ADD COMMENTlink written 10 months ago by AABI110
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1393 users visited in the last hour