Question: could not open genomeParameters.txt
2.8 years ago by
yueli7 • 190
yueli7 • 190 wrote:
By using STAR, I have already successfully generated genome indexes.
Apr 26 05:20:22 ..... finished successfully
Then I try to running mapping.
It said could not find open genome file. Actually, genomeParameters.txt was in my folder genomeDir.
Thanks in advance for great help!
./STAR --runThreadN 30 --readFilesCommand gunzip -c --readFilesIn /home/administrator/human/549_S124_L008_R1_001.fastq.gz /home/administrator/human/549_S124_ Apr 26 06:53:21 ..... started STAR run Apr 26 06:53:21 ..... loading genome EXITING because of FATAL ERROR: could not open genome file ./GenomeDir//genomeParameters.txt SOLUTION: check that the path to genome files, specified in --genomeDir is correct and the files are present, and have user read permsissions
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