E-MTAB-5273 have two files E-MTAB-5273.raw.1.zip and E-MTAB-5273.processed.1.zip both .txt,
GSE54514 also have two filesGSE54514_RAW.tar and GSE54514_non-normalized.txt.gz - one .bgx and other .txt respectively.
First question: E-MTAB-5273.raw file represents non-normalized data? While processed file, represents normalized?
Second question: What is the best way to analyze non-normalized Illumina HumanHT-12?