Any RNASeq dataset with large number of replicates out there?
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3.7 years ago

Does anyone know of an RNAseq dataset with a large number (min 5-10) of replicate - like the Bottomly et al 2011 dataset but with paired-end reads?

Cheers Kristoffer

RNA-Seq dataset • 806 views
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3.7 years ago

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4878611/

42 replicates, but single end

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3.7 years ago
Tm ★ 1.0k

You can also look for RNASeq pair-end data of 6 replicates whose detail is provided in hisat publication

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That seems to be just one chromosome (chr X)?

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Same data is available for complete set of chromosomes, but just for the sake of reducing the pipeline execution time, they have taken a subset of data.

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