I try to use blastx compare Trinity.fasta file with swissprot db (sp) and Uniref90 using Linux base. SO, I have to download swissprot db (sp) and Uniref90 in fasta file from http://www.uniprot.org/downloads
After download I got uniref90.fasta.gz.part and I can not extract this file. How can I extract this file?.
If you have some guidance about functional annotation using Trinity fasta file please let me know.