Question: Genome/Exome + RNASeq cohort
0
gravatar for Nick
11 months ago by
Nick20
NIH
Nick20 wrote:

Does this exist? I'm looking for a substantial cohort with genomes or exomes AND rnaseq data for a number of individuals.

I know of the Mayo GWAS... but ideally, I'm looking for genome/exome data to come as either raw FASTQs that I can process on my own, or downloadable gvcfs or even vcfs. I'd like RNAseq data as raw fastqs or to have the gene list output of a differential expression analysis.

cohort rna-seq gwas exome genome • 311 views
ADD COMMENTlink written 11 months ago by Nick20

Does the tissue matter?

ADD REPLYlink written 11 months ago by WouterDeCoster38k

Blood or fibroblast would be ideal; but no, not really.

ADD REPLYlink written 11 months ago by Nick20

You could search the EGA, ENA, ArrayExpress, SRA, etc.

ADD REPLYlink written 11 months ago by Kevin Blighe41k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 904 users visited in the last hour