Question: intansv - "Error : solving row 4: negative widths are not allowed"... whereas there's no negative widths
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16 months ago by
AA0 wrote:


I'm trying to annotate 9 tables of structural variants called by Delly2 with svAnnotation from the intansv package. While annotating duplications, I systemically get the error "Error : solving row 4: negative widths are not allowed". But my tables don't contain any negative width, here is for instance a structural variant that can't be annotated :

chr3 140621105 140622358 1253 PE=2;SR=4

When I remove these lines, it works perfectly.

Could anyone please help me ?

Thank you very much

intansv delly2 R • 414 views
ADD COMMENTlink written 16 months ago by AA0
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