my data set belong to human. I construct bwa index(wg.fa) and for alignment I run below command:
bwa mem ~/cirRNA/apps/wg.fa sra_data_SRR1427482.fastq -t 30 > sra_data_SRR1427482_bwa.sam
and then in terminal I have below result:
[M::bwa_idx_load_from_disk] read 0 ALT contigs [M::process] read 8646532 sequences (300000008 bp)...
but after some minutes, my process will be killed.
I also, ran this command for one other sample and receive below message:
[M::bwa_idx_load_from_disk] read 0 ALT contigs Segmentation fault (core dumped)
I appreciate if you share your comment with me.