Question: wget and download
0
gravatar for qudrat
6 months ago by
qudrat50
NATIONAL INSTITUTE OF IMMUNOLOGY, INDIA
qudrat50 wrote:

Hello all, I am trying to download a .sra file using wget command but every time the connection is closed and it retry and download is never complete. Please help me.

download • 216 views
ADD COMMENTlink modified 6 months ago by grant.hovhannisyan1.3k • written 6 months ago by qudrat50

Look into local firewall and/or other restrictions. Also make sure you are not trying to download restricted data that requires authorization.

Where possible you should search EBA-ENA and download fastq files directly.

ADD REPLYlink written 6 months ago by genomax59k

use ncbi fastq-dump https://www.ncbi.nlm.nih.gov/books/NBK158900/

ADD REPLYlink written 6 months ago by Pierre Lindenbaum115k
1
gravatar for grant.hovhannisyan
6 months ago by
grant.hovhannisyan1.3k wrote:

These posts answer your question

How to download raw sequence data from GEO/SRA

C: download from SRA

ADD COMMENTlink modified 6 months ago • written 6 months ago by grant.hovhannisyan1.3k
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