Question: wget and download
0
gravatar for qudrat
11 months ago by
qudrat60
NATIONAL INSTITUTE OF IMMUNOLOGY, INDIA
qudrat60 wrote:

Hello all, I am trying to download a .sra file using wget command but every time the connection is closed and it retry and download is never complete. Please help me.

download • 302 views
ADD COMMENTlink modified 11 months ago by grant.hovhannisyan1.5k • written 11 months ago by qudrat60

Look into local firewall and/or other restrictions. Also make sure you are not trying to download restricted data that requires authorization.

Where possible you should search EBA-ENA and download fastq files directly.

ADD REPLYlink written 11 months ago by genomax65k

use ncbi fastq-dump https://www.ncbi.nlm.nih.gov/books/NBK158900/

ADD REPLYlink written 11 months ago by Pierre Lindenbaum119k
1
gravatar for grant.hovhannisyan
11 months ago by
grant.hovhannisyan1.5k wrote:

These posts answer your question

How to download raw sequence data from GEO/SRA

C: download from SRA

ADD COMMENTlink modified 11 months ago • written 11 months ago by grant.hovhannisyan1.5k
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