Question: Tissue specific Disease Ontology and Human Phenotype Ontology.
gravatar for humble_farmboy
11 months ago by
humble_farmboy0 wrote:

I'm trying to extract all DOIDs (Disease Ontology IDs) and HP IDs (Human Phenotype Ontology IDs) that are annotated to a specific tissue type. For example, I want all the DOIDs and HPIDs annotated to ALL liver disorders. We already extracted the ones obtained by searching "liver" on, however, they are not even close to complete.

We are currently manually extracting them by reading through the hierarchy, but we are looking for a more efficient way.

Any suggestions would be highly appreciated.

Thanks in advance.

ADD COMMENTlink written 11 months ago by humble_farmboy0
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