Question: Seurat identify clusters associated with two time points in tSNE plot
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gravatar for rob.costa1234
2.1 years ago by
rob.costa1234250
United States
rob.costa1234250 wrote:

I have two time points ScRNAseq data for day 2 and 5 generated in 10X genomics. When I generate tSNE plot Can I identify clusters associated with day 2 and day 10? Any suggestion. Seurat help is sending automatic messages that no one is available and are traveling.

Thanks

seurat scrnaseq • 819 views
ADD COMMENTlink written 2.1 years ago by rob.costa1234250

Do you have "day" information as a column in object@meta.data or do you wish to extract it first from your Seurat object and only then generate the t-SNE plot?

ADD REPLYlink written 2.1 years ago by dppb0590
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