Problem with SAFE clustering

Question

[monika_krzak]

Hello, Im running SAFE clustering on the RNAseq data with command:

sce - Single cell object

data=data.matrix(counts(sce)) cluster_results=individual_clustering(data, datatype = "count", SC3 = TRUE, gene_filter = FALSE, CIDR = TRUE, Seurat = TRUE, nPC = NULL, resolution = 0.9, seurat_min_cell = 200, resolution_min = 1.2, tSNE = TRUE, var_genes = NULL, SEED = 123)

And Im getting this error after "Scaling data matrix":

Error in rbind number of columns of matrices must match

Does anybody know if the problem is related to the object that Im providing and what could be the fix ?

Best, Monika