Off topic:low expression gene in RNASeq
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5.9 years ago

How everyone,

I have recently got a RNASeq data. The mRNA level of my target gene is extremely low though the phenotype is very strong. All the change trend is consistent with qRT-PCR test, indicating the analysis pipeline should be fine. The knockdown is achieved through introducing shRNA and no off-target can be found through prediction. I am wondering why my mRNA is so lower for this gene?

It will be really appreciated if anyone can give me any idea!

Many thanks!

RNASeq low expression • 899 views
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