Question: Clustering 454 amplicon data
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gravatar for Denis
24 months ago by
Denis190
Denis190 wrote:

Hi, I'm stuck on 454 amplicons clustering. Because of the indels in homopolymer stretches (etxremely common in this kind of data), one single OTU could be splitted into several ones. Is there any way to optimaze clustering, to count only SNPs not indels during identity culculation?

sequencing snp next-gen • 416 views
ADD COMMENTlink written 24 months ago by Denis190
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