Question: Clustering 454 amplicon data
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gravatar for Denis
11 months ago by
Denis50
Denis50 wrote:

Hi, I'm stuck on 454 amplicons clustering. Because of the indels in homopolymer stretches (etxremely common in this kind of data), one single OTU could be splitted into several ones. Is there any way to optimaze clustering, to count only SNPs not indels during identity culculation?

sequencing snp next-gen • 265 views
ADD COMMENTlink written 11 months ago by Denis50
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